Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphatase pap2 family protein | H9L12_06305 | O34349 | + | 1254953 - 1255453 | 17340.2 |
| duf938 domain-containing protein | H9L12_06310 | Q7ZVJ8 | - | 1255388 - 1256029 | 22903.3 |
| duf4281 domain-containing protein | H9L12_06315 | Not Available | - | 1256016 - 1256486 | 17024.3 |
| duf1453 family protein | H9L12_06320 | Not Available | - | 1256483 - 1256998 | 18821.8 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpb | H9L12_06325 | Q9A354 | - | 1256995 - 1258593 | 56145.1 |
| aminomethyl-transferring glycine dehydrogenase subunit gcvpa | H9L12_06330 | Q1GRZ2 | - | 1258590 - 1259948 | 47901.0 |
| methyltransferase domain-containing protein | H9L12_06335 | O74529 | - | 1259950 - 1260684 | 26306.1 |
| glycine cleavage system protein gcvh | H9L12_06340 | Q92Q10 | - | 1260693 - 1261064 | 13333.4 |
| glycine cleavage system aminomethyltransferase gcvt | H9L12_06345 | Q54DD3 | - | 1261070 - 1262191 | 40661.9 |
| hypothetical protein | H9L12_06350 | Not Available | - | 1262538 - 1263170 | 22327.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.