Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine hydroxymethyltransferase | H9L12_06205 | Q1GV11 | + | 1239093 - 1240433 | 47291.3 |
| transcriptional repressor nrdr | H9L12_06210 | Q2G644 | + | 1240437 - 1240916 | 18110.2 |
| rna methyltransferase | H9L12_06215 | A6TCF3 | + | 1240913 - 1241635 | 25750.0 |
| hypothetical protein | H9L12_06220 | Not Available | - | 1241583 - 1242413 | 29896.8 |
| hypothetical protein | H9L12_06225 | Not Available | - | 1242383 - 1243111 | 25331.4 |
| chorismate mutase | H9L12_06230 | Q51507 | - | 1243101 - 1243412 | 11805.0 |
| 30s ribosomal protein s4 | H9L12_06235 | Q9Z5U7 | + | 1243593 - 1244207 | 23159.1 |
| m61 family metallopeptidase | H9L12_06240 | Not Available | - | 1244270 - 1246045 | 65526.5 |
| agmatine deiminase family protein | H9L12_06245 | C1CK08 | + | 1246147 - 1247121 | 34360.8 |
| n-carbamoylputrescine amidase | H9L12_06250 | Q3HVN1 | + | 1247118 - 1247969 | 31197.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.