Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein-export chaperone secb | H9L12_06105 | Q1GRJ6 | + | 1218469 - 1219002 | 19312.8 |
| murein biosynthesis integral membrane protein murj | H9L12_06110 | O05467 | + | 1219021 - 1220589 | 55179.0 |
| tryptophan--trna ligase | H9L12_06115 | Q9AC05 | + | 1220597 - 1221592 | 36029.5 |
| atp-dependent dna helicase | H9L12_06120 | Not Available | + | 1221696 - 1222342 | 22929.6 |
| atp-dependent dna helicase | H9L12_06125 | Q9S493 | - | 1222415 - 1223793 | 49450.0 |
| 30s ribosomal protein s20 | H9L12_06130 | Q2G300 | - | 1224178 - 1224438 | 9382.53 |
| atp-dependent dna helicase | H9L12_06135 | Not Available | - | 1224554 - 1225370 | 28697.6 |
| class i sam-dependent methyltransferase | H9L12_06140 | Q9X3X2 | + | 1225420 - 1226151 | 26887.2 |
| atp-dependent dna helicase | H9L12_06145 | A3MNU1 | + | 1226148 - 1227625 | 52110.9 |
| hypothetical protein | H9L12_06150 | Not Available | + | 1227680 - 1228753 | 37896.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.