Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | H9L12_06055 | Q1GN72 | + | 1209216 - 1209428 | 7605.41 |
| membrane protein insertase yidc | H9L12_06060 | Q9RNL5 | + | 1209453 - 1211180 | 63047.8 |
| yiha family ribosome biogenesis gtp-binding protein | H9L12_06065 | Q1GN74 | + | 1211177 - 1211821 | 23751.6 |
| glutathione s-transferase family protein | H9L12_06070 | P77544 | + | 1211839 - 1212507 | 25205.1 |
| cupin domain-containing protein | H9L12_06075 | Not Available | - | 1212504 - 1212968 | 16933.9 |
| succinyl-diaminopimelate desuccinylase | H9L12_06080 | Q1GRJ2 | + | 1213019 - 1214152 | 39762.3 |
| eal domain-containing protein | H9L12_06085 | O34311 | - | 1214133 - 1215815 | 61066.3 |
| atp-dependent dna helicase | H9L12_06090 | Not Available | - | 1215899 - 1216428 | 18867.5 |
| atp-dependent dna helicase | H9L12_06095 | Not Available | - | 1216409 - 1217580 | 40904.8 |
| tim44 domain-containing protein | H9L12_06100 | O35094 | - | 1217577 - 1218233 | 23348.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.