Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | H9L12_05655 | Q5LNI8 | + | 1139940 - 1140842 | 32033.9 |
| trna pseudouridine(38-40) synthase trua | H9L12_05660 | A5VDL9 | + | 1140839 - 1141579 | 27158.3 |
| pyridoxal-dependent decarboxylase, exosortase a system-associated | H9L12_05665 | Q2L4H3 | - | 1141576 - 1142805 | 43139.1 |
| amp-binding protein | H9L12_05670 | Q9EY88 | - | 1142802 - 1144304 | 53100.6 |
| acyl carrier protein | H9L12_05675 | O67611 | + | 1144379 - 1144672 | 10529.4 |
| atp-dependent dna helicase | H9L12_05680 | O94340 | + | 1144602 - 1145265 | 23603.1 |
| thioredoxin-disulfide reductase | H9L12_05685 | Q92I02 | - | 1145160 - 1146125 | 34314.9 |
| hypothetical protein | H9L12_05690 | Not Available | - | 1146170 - 1147588 | 50728.8 |
| hypothetical protein | H9L12_05695 | Not Available | - | 1147668 - 1147946 | 9392.41 |
| atp-dependent dna helicase | H9L12_05700 | Not Available | - | 1147988 - 1148763 | 27928.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.