Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphotransferase | H9L12_05355 | Q2YQA5 | - | 1081521 - 1082177 | 23011.7 |
| rlua family pseudouridine synthase | H9L12_05360 | P50513 | + | 1082294 - 1083235 | 34039.2 |
| rna polymerase sigma factor rpoh | H9L12_05365 | P50512 | + | 1083289 - 1084194 | 33940.7 |
| atp-dependent dna helicase | H9L12_05370 | Q55421 | + | 1084325 - 1086351 | 72210.1 |
| dicarboxylate/amino acid:cation symporter | H9L12_05375 | P24944 | - | 1086352 - 1087674 | 46681.3 |
| aminopeptidase p family protein | H9L12_05380 | O84913 | - | 1087728 - 1088993 | 45262.4 |
| atp-dependent dna helicase | H9L12_05385 | P28246 | + | 1089065 - 1090296 | 43067.6 |
| recombinase reca | H9L12_05390 | Q9X5D8 | - | 1090353 - 1091420 | 37998.7 |
| response regulator | H9L12_05395 | Not Available | - | 1091531 - 1091836 | 10960.2 |
| response regulator | H9L12_05400 | P0DOA0 | - | 1091923 - 1094160 | 79139.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.