Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | H9L12_05205 | A5V9P7 | - | 1060393 - 1061082 | 23794.9 |
| atp-dependent dna helicase | H9L12_05210 | P0AGD9 | - | 1061118 - 1062577 | 51422.4 |
| duf924 domain-containing protein | H9L12_05215 | Not Available | - | 1062725 - 1063270 | 20461.2 |
| hypothetical protein | H9L12_05220 | Not Available | - | 1063267 - 1063671 | 14258.0 |
| diaminopimelate epimerase | H9L12_05225 | A5VAG4 | + | 1063737 - 1064543 | 28326.8 |
| miab/rimo family radical sam methylthiotransferase | H9L12_05230 | Q9ZDB6 | + | 1064540 - 1065727 | 42806.6 |
| signal recognition particle-docking protein ftsy | H9L12_05235 | A9CHH2 | + | 1065727 - 1066641 | 32160.8 |
| septation protein a | H9L12_05240 | P30961 | + | 1066677 - 1067246 | 20676.9 |
| abc transporter atp-binding protein | H9L12_05245 | P36879 | + | 1067243 - 1068181 | 34301.6 |
| abc transporter permease | H9L12_05250 | P0AFN8 | + | 1068178 - 1068939 | 27424.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.