Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s2 | H9L12_05155 | A5V3G2 | - | 1050497 - 1051252 | 27151.5 |
| hypothetical protein | H9L12_05160 | Not Available | + | 1051536 - 1051769 | 8379.46 |
| atp-dependent dna helicase | H9L12_05165 | Not Available | - | 1051690 - 1052456 | 26895.2 |
| phosphatidylserine decarboxylase | H9L12_05170 | Q1GRP7 | - | 1052498 - 1053229 | 26523.1 |
| nadp-dependent isocitrate dehydrogenase | H9L12_05175 | P50215 | + | 1053345 - 1054565 | 45853.5 |
| fad-dependent oxidoreductase | H9L12_05180 | Q3S8R0 | - | 1054562 - 1055767 | 43729.4 |
| atp-dependent dna helicase | H9L12_05185 | Not Available | - | 1055830 - 1056038 | 7684.32 |
| atp-dependent dna helicase | H9L12_05190 | A6TEY9 | + | 1056137 - 1057851 | 59876.1 |
| nad(p)/fad-dependent oxidoreductase | H9L12_05195 | O30973 | + | 1058642 - 1059889 | 44476.6 |
| 16s rrna processing protein rimm | H9L12_05200 | Q1GPJ1 | - | 1059886 - 1060389 | 17497.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.