Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-acp dehydratase fabz | H9L12_05105 | A5V3H2 | - | 1040636 - 1041085 | 15938.8 |
| omph family outer membrane protein | H9L12_05110 | Not Available | - | 1041109 - 1041687 | 20150.3 |
| outer membrane protein assembly factor bama | H9L12_05115 | Q9K1H0 | - | 1041687 - 1044290 | 96226.1 |
| rip metalloprotease | H9L12_05120 | Q8UFL7 | - | 1044383 - 1045513 | 41343.9 |
| atp-dependent dna helicase | H9L12_05125 | Q9X5F2 | - | 1045515 - 1046677 | 41911.4 |
| phosphatidate cytidylyltransferase | H9L12_05130 | Q8YHH2 | - | 1046674 - 1047321 | 22770.2 |
| di-trans,poly-cis-decaprenylcistransferase | H9L12_05135 | Q9X5F1 | - | 1047318 - 1047986 | 24716.5 |
| ribosome recycling factor | H9L12_05140 | A5V3G5 | - | 1048064 - 1048621 | 20631.7 |
| ump kinase | H9L12_05145 | Q1GRQ2 | - | 1048625 - 1049347 | 25420.0 |
| elongation factor ts | H9L12_05150 | Q1GRQ1 | - | 1049458 - 1050402 | 32322.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.