Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Sphingomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Sphingomonas |
| Species | Sphingomonas rhizophila |
| Strain | THG-T61 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingomonas rhizophila THG-T61
Accession NumberCP060717.1
Gene Summary
Adenine Count
443456 bp
Thymine Count
446965 bp
Guanine Count
833954 bp
Cytosine Count
833108 bp
Genome Length
2557483 bp
Protein-coding Genes
2563 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nyn domain-containing protein | H9L12_04955 | Q57905 | - | 1013872 - 1014606 | 26810.1 |
| hypothetical protein | H9L12_04960 | Not Available | + | 1014719 - 1015039 | 10712.7 |
| carbonic anhydrase | H9L12_04965 | P46511 | - | 1015058 - 1015690 | 22743.9 |
| lipoyl synthase | H9L12_04970 | A5V2U6 | + | 1015778 - 1016716 | 34346.4 |
| type ii toxin-antitoxin system rata family toxin | H9L12_04975 | Q9ZDZ7 | + | 1016763 - 1017173 | 15520.3 |
| cina family protein | H9L12_04980 | Q67NW5 | - | 1017134 - 1017640 | 17022.2 |
| bifunctional 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase/2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | H9L12_04985 | A5V2U9 | - | 1017718 - 1018863 | 39680.5 |
| trna dihydrouridine synthase dusb | H9L12_04990 | P45672 | + | 1018916 - 1019914 | 35994.6 |
| pas domain-containing sensor histidine kinase | H9L12_04995 | Q04850 | + | 1020062 - 1022266 | 80948.3 |
| sigma-54-dependent fis family transcriptional regulator | H9L12_05000 | Q04849 | + | 1022266 - 1023648 | 50672.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.