Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| secy protein translocase subunit secy/sec61 alpha | Cabys_922 | O66491 | + | 1084903 - 1086231 | 49124.7 |
| map methionine aminopeptidase, type i | Cabys_923 | P50614 | + | 1086238 - 1086993 | 27959.9 |
| infa bacterial translation initiation factor 1 (bif-1) | Cabys_924 | P60516 | + | 1086998 - 1087219 | 8364.35 |
| rpsm ssu ribosomal protein s13p | Cabys_925 | Q0AUK6 | + | 1087369 - 1087740 | 14027.3 |
| small subunit ribosomal protein s11 | Cabys_926 | Q8R7Y0 | + | 1087886 - 1088155 | 9283.32 |
| rpsd small subunit ribosomal protein s4 | Cabys_927 | A6LEG6 | + | 1088174 - 1088788 | 23987.7 |
| rpoa dna-directed rna polymerase subunit alpha | Cabys_928 | Q2S3N9 | + | 1088821 - 1089813 | 37692.8 |
| rplq large subunit ribosomal protein l17 | Cabys_929 | Q39XX8 | + | 1089833 - 1090432 | 22779.1 |
| uncharacterized lipoprotein yddw, upf0748 family | Cabys_930 | Not Available | + | 1090560 - 1091642 | 42138.2 |
| chromosome partitioning protein | Cabys_931 | P37522 | + | 1091658 - 1092428 | 28366.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.