Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rplc lsu ribosomal protein l3p | Cabys_902 | A5FMY1 | + | 1076190 - 1076810 | 22211.4 |
| rpld lsu ribosomal protein l4p | Cabys_903 | Q3B6G0 | + | 1076828 - 1077457 | 23101.0 |
| rplw lsu ribosomal protein l23p | Cabys_904 | B3QY26 | + | 1077454 - 1077753 | 11483.2 |
| rplb lsu ribosomal protein l2p | Cabys_905 | B5YDU6 | + | 1077774 - 1078598 | 30429.3 |
| rpss ssu ribosomal protein s19p | Cabys_906 | A6KYJ1 | + | 1078616 - 1078903 | 10781.3 |
| rplv large subunit ribosomal protein l22 | Cabys_907 | Q250M7 | + | 1078918 - 1079262 | 12880.0 |
| rpsc ssu ribosomal protein s3p | Cabys_908 | Q11QB8 | + | 1079287 - 1079922 | 23934.4 |
| rplp lsu ribosomal protein l16p | Cabys_909 | Q8R7W1 | + | 1079944 - 1080351 | 15431.2 |
| rpmc lsu ribosomal protein l29p | Cabys_910 | A0QSD9 | + | 1080368 - 1080577 | 8184.05 |
| ssu ribosomal protein s17p | Cabys_911 | Q5L8B8 | + | 1080645 - 1080848 | 8024.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.