Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rpla lsu ribosomal protein l1p | Cabys_892 | Q2RFN6 | + | 1061717 - 1062415 | 25443.1 |
| rplj lsu ribosomal protein l10p | Cabys_893 | B2A4C8 | + | 1062435 - 1062956 | 19338.7 |
| large subunit ribosomal protein l7/l12 | Cabys_894 | P0A0W8 | + | 1063120 - 1063365 | 8494.23 |
| rpob dna-directed rna polymerase subunit beta | Cabys_895 | Q2S1Q5 | + | 1063400 - 1067176 | 141195.0 |
| rpoc dna-directed rna polymerase subunit beta' | Cabys_896 | A6LE80 | + | 1067310 - 1071599 | 160605.0 |
| small subunit ribosomal protein s12 | Cabys_897 | B2J5A8 | + | 1071900 - 1072034 | 4898.0 |
| rpsg ssu ribosomal protein s7p | Cabys_898 | B8J857 | + | 1072055 - 1072522 | 17974.1 |
| fusa translation elongation factor 2 (ef-2/ef-g) | Cabys_899 | Q748Y8 | + | 1072538 - 1074619 | 76865.4 |
| translation elongation factor 1a (ef-1a/ef-tu) | Cabys_900 | Q2II78 | + | 1074649 - 1075839 | 43761.6 |
| rpsj ssu ribosomal protein s10p | Cabys_901 | B3WAL8 | + | 1075859 - 1076167 | 11443.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.