Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| por secretion system c-terminal sorting domain-containing protein | Cabys_851 | Not Available | + | 1004556 - 1006700 | 78384.8 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_852 | Not Available | + | 1006760 - 1009555 | 101067.0 |
| small multidrug resistance pump | Cabys_853 | P0AGC9 | + | 1009570 - 1009911 | 11962.4 |
| hypothetical protein | Cabys_854 | Not Available | - | 1010325 - 1010471 | 5731.04 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_855 | Not Available | + | 1010392 - 1012578 | 80112.2 |
| hypothetical protein | Cabys_856 | Not Available | + | 1012588 - 1012755 | 6139.07 |
| hypothetical protein | Cabys_857 | Not Available | + | 1013062 - 1013175 | 4441.44 |
| tetratricopeptide repeat-containing protein | Cabys_858 | Not Available | + | 1013502 - 1014845 | 52425.9 |
| transposase | Cabys_859 | Not Available | - | 1014903 - 1016699 | 70253.2 |
| helix-turn-helix domain-containing protein | Cabys_860 | O31517 | + | 1016834 - 1017190 | 13594.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.