Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane receptor protein, mostly fe transport | Cabys_841 | P38370 | + | 979367 - 982033 | 101194.0 |
| hypothetical protein | Cabys_842 | Not Available | + | 982090 - 985464 | 124020.0 |
| hypothetical protein | Cabys_843 | Not Available | + | 985512 - 986546 | 37419.0 |
| hypothetical protein | Cabys_844 | Not Available | + | 987398 - 990484 | 114789.0 |
| hypothetical protein | Cabys_845 | Not Available | + | 990519 - 993869 | 125485.0 |
| hypothetical protein | Cabys_846 | Not Available | + | 994065 - 997418 | 126565.0 |
| pas domain s-box-containing protein | Cabys_847 | P0DOA0 | - | 997634 - 1001542 | 147849.0 |
| abc-2 type transport system permease protein | Cabys_848 | O07523 | - | 1001827 - 1003083 | 47460.1 |
| abc-2 type transport system atp-binding protein | Cabys_849 | C0SPB4 | - | 1003076 - 1003984 | 34161.6 |
| hypothetical protein | Cabys_850 | Not Available | - | 1004492 - 1004605 | 4456.67 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.