Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trmd trna (guanine37-n(1)-) methyltransferase | Cabys_821 | Q18BC2 | + | 944724 - 945425 | 26950.8 |
| rpls lsu ribosomal protein l19p | Cabys_822 | P30529 | + | 945445 - 945786 | 12968.3 |
| hypothetical protein | Cabys_823 | Not Available | - | 945888 - 946097 | 7833.31 |
| ig-like domain-containing protein | Cabys_824 | Not Available | + | 946416 - 948098 | 63675.4 |
| dapf diaminopimelate epimerase | Cabys_825 | O67693 | + | 948095 - 948916 | 30004.4 |
| tfp pilus assembly protein pilf | Cabys_826 | Not Available | + | 948956 - 949888 | 35628.9 |
| mannose-1-phosphate guanylyltransferase | Cabys_827 | Q48462 | + | 950003 - 951079 | 40682.0 |
| hypothetical protein | Cabys_828 | Not Available | + | 951113 - 951388 | 10852.2 |
| pilz domain-containing protein | Cabys_829 | Not Available | + | 951399 - 951737 | 12582.4 |
| transposase domain (duf772) | Cabys_830 | Not Available | - | 952018 - 953604 | 61349.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.