Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| molybdopterin guanine dinucleotide biosynthesis accessory protein mobb | Cabys_811 | P32125 | + | 938215 - 938709 | 18401.2 |
| hsp20 family protein | Cabys_812 | Q4UKR8 | - | 939194 - 939631 | 16746.3 |
| hypothetical protein | Cabys_813 | Not Available | - | 939652 - 939801 | 5642.97 |
| hypothetical protein | Cabys_814 | Not Available | + | 939894 - 940154 | 10245.5 |
| hypothetical protein | Cabys_815 | Not Available | + | 940319 - 940441 | 4455.35 |
| 16s rrna (cytosine967-c5)-methyltransferase | Cabys_816 | P72943 | + | 940590 - 941942 | 52395.0 |
| ffh signal recognition particle subunit ffh/srp54 (srp54) | Cabys_817 | P37105 | + | 942098 - 943423 | 49243.9 |
| rpsp small subunit ribosomal protein s16 | Cabys_818 | A1BGL9 | + | 943509 - 943883 | 14415.8 |
| rna-binding protein (kh domain) | Cabys_819 | O66524 | + | 943976 - 944212 | 8611.5 |
| rimm 16s rrna processing protein rimm | Cabys_820 | B0K9W5 | + | 944219 - 944722 | 19052.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.