Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gpmi phosphoglycerate mutase | Cabys_791 | Q0STD7 | - | 916844 - 918382 | 57840.9 |
| phosphopantothenoylcysteine decarboxylase | Cabys_792 | Q8BZB2 | - | 918827 - 919372 | 20017.5 |
| 3-hydroxyisobutyrate dehydrogenase/glyoxylate/succinic semialdehyde reductase | Cabys_793 | Q9LSV0 | + | 919623 - 920483 | 31183.3 |
| rubrerythrin | Cabys_794 | Not Available | + | 920508 - 920978 | 18503.9 |
| n-acetylmuramoyl-l-alanine amidase | Cabys_795 | P36548 | + | 921203 - 922753 | 59369.1 |
| muri glutamate racemase | Cabys_796 | Q39Y84 | + | 922762 - 923622 | 31448.4 |
| low affinity penicillin binding protein | Cabys_797 | Not Available | + | 923615 - 924577 | 36128.6 |
| obg gtp-binding protein | Cabys_798 | Q8KAF0 | + | 924597 - 925592 | 36195.3 |
| dna protecting protein dpra | Cabys_799 | P73345 | + | 925589 - 926680 | 40131.7 |
| sulfide dehydrogenase (flavoprotein) subunit sudb | Cabys_800 | Q8U194 | + | 926993 - 927859 | 31634.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.