Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lema protein | Cabys_761 | A8AVK0 | - | 882381 - 882992 | 22881.7 |
| hypothetical protein | Cabys_762 | A9A2Y3 | - | 883230 - 884063 | 30822.9 |
| hypothetical protein | Cabys_763 | Not Available | + | 884227 - 884343 | 4218.92 |
| putative glycerol-1-phosphate prenyltransferase | Cabys_764 | C7PEQ0 | + | 884617 - 885369 | 26730.3 |
| gmha phosphoheptose isomerase | Cabys_765 | A5UVV6 | + | 885370 - 885957 | 20908.3 |
| udp-glucose 4-epimerase | Cabys_766 | Q7BJX9 | + | 886209 - 887159 | 34780.4 |
| dna repair protein radc | Cabys_767 | B3PXW5 | + | 887517 - 888200 | 26658.5 |
| dna helicase-2 / atp-dependent dna helicase pcra | Cabys_768 | Q5HN29 | + | 888204 - 891032 | 111280.0 |
| transcriptional regulator, abiei antitoxin, type iv ta system | Cabys_769 | Not Available | + | 891102 - 891695 | 22614.7 |
| dna (cytosine-5)-methyltransferase 1 | Cabys_770 | P0DW08 | + | 891815 - 893065 | 49038.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.