Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hdig domain-containing protein | Cabys_751 | Q9HWS0 | - | 869909 - 871138 | 46365.5 |
| transposase dde domain-containing protein | Cabys_752 | Q46731 | - | 871419 - 873677 | 86874.9 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | Cabys_753 | O67310 | + | 873972 - 875837 | 71742.2 |
| hypothetical protein | Cabys_754 | P84138 | + | 875858 - 876610 | 28037.8 |
| serine protease, subtilisin family | Cabys_755 | Q5JIZ5 | + | 876656 - 878389 | 63709.3 |
| lexa sos-response transcriptional repressor, lexa | Cabys_756 | P61609 | + | 878600 - 879214 | 23120.2 |
| hypothetical protein | Cabys_757 | A3DDH9 | + | 879201 - 879671 | 17574.2 |
| inner membrane protein | Cabys_758 | P44300 | - | 879744 - 880364 | 24295.9 |
| tlp18.3, psb32 and molo-1 founding protein of phosphatase | Cabys_759 | P55140 | - | 880912 - 881349 | 16757.8 |
| uncharacterized protein | Cabys_760 | P55140 | - | 881598 - 882368 | 27894.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.