Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| regulatory protein, fis family | Cabys_741 | Q06065 | + | 860287 - 861636 | 52335.4 |
| lysa diaminopimelate decarboxylase | Cabys_742 | O67262 | + | 861726 - 862982 | 46442.4 |
| alanine racemase | Cabys_743 | Q8R860 | + | 862984 - 864099 | 42061.4 |
| protein of unknown function (duf4835) | Cabys_744 | Not Available | + | 864197 - 865033 | 32838.9 |
| smpb ssra-binding protein | Cabys_745 | Q3AFC2 | - | 865512 - 865973 | 17979.2 |
| hypothetical protein | Cabys_746 | Not Available | - | 866128 - 867450 | 51680.7 |
| hypothetical protein | Cabys_747 | Not Available | + | 867687 - 867833 | 5931.2 |
| protease i | Cabys_748 | Q9M8R4 | + | 867856 - 868443 | 21378.6 |
| hypothetical protein | Cabys_749 | Not Available | - | 868478 - 868612 | 5011.28 |
| ribonuclease z | Cabys_750 | Q9RXP0 | + | 868598 - 869605 | 38968.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.