Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| serine phosphatase rsbu, regulator of sigma subunit | Cabys_721 | P40399 | - | 835526 - 837487 | 75088.1 |
| pteridine reductase | Cabys_722 | Q9X248 | - | 837636 - 838370 | 26679.4 |
| glyoxylase, beta-lactamase superfamily ii | Cabys_723 | P54501 | - | 838374 - 839000 | 23416.9 |
| glyoxylate reductase | Cabys_724 | Q9C4M5 | - | 839023 - 839994 | 35818.8 |
| hypothetical protein | Cabys_725 | Not Available | + | 840246 - 840704 | 17775.7 |
| thiol-disulfide isomerase or thioredoxin | Cabys_726 | Q9KCJ4 | + | 840716 - 841249 | 20308.7 |
| b3/b4 domain-containing protein (dna/rna-binding domain of phe-trna-synthetase) | Cabys_727 | Q8RHB5 | + | 841266 - 841937 | 24876.0 |
| hypothetical protein | Cabys_728 | Q46731 | - | 842167 - 844425 | 86792.7 |
| transposase | Cabys_729 | P19780 | + | 844588 - 845829 | 47440.1 |
| dolichol kinase | Cabys_730 | P74653 | - | 846459 - 847160 | 26461.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.