Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5'-nucleotidase, lipoprotein e(p4) family | Cabys_711 | P26093 | + | 825777 - 826565 | 30267.3 |
| exodeoxyribonuclease-3 | Cabys_712 | O26314 | - | 826707 - 827474 | 30152.8 |
| hypothetical protein | Cabys_713 | Not Available | - | 827449 - 827565 | 4611.76 |
| dna polymerase-3 subunit delta' | Cabys_714 | P37540 | + | 827641 - 828741 | 42585.4 |
| cell fate regulator yaat, psp1 superfamily (controls sporulation, competence, biofilm development) | Cabys_715 | P37541 | + | 828743 - 829579 | 32266.4 |
| l-2-hydroxyglutarate oxidase | Cabys_716 | S2DJ52 | + | 829560 - 830774 | 45017.7 |
| hypothetical protein | Cabys_717 | Not Available | - | 831354 - 831611 | 10570.8 |
| sers seryl-trna synthetase | Cabys_718 | B0KAI8 | + | 831728 - 833131 | 53558.1 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | Cabys_719 | Q42870 | + | 833147 - 833860 | 26842.4 |
| diguanylate cyclase (ggdef) domain-containing protein | Cabys_720 | Q9A5I5 | - | 833882 - 835516 | 63007.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.