Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | Cabys_681 | P42112 | + | 790585 - 791853 | 47411.8 |
| uncharacterized conserved protein yece, duf72 family | Cabys_682 | O32135 | - | 791833 - 792645 | 32116.0 |
| short-chain dehydrogenase | Cabys_683 | P25970 | + | 792709 - 793425 | 26495.6 |
| undecaprenyl diphosphate synthase | Cabys_684 | Q8RA26 | + | 793549 - 794316 | 29387.3 |
| hypothetical protein | Cabys_685 | Not Available | + | 794325 - 794738 | 15120.5 |
| dihydrofolate synthase / folylpolyglutamate synthase | Cabys_686 | Q05865 | + | 794743 - 796038 | 48969.3 |
| rho transcription termination factor rho | Cabys_687 | O83281 | + | 796308 - 797558 | 47402.6 |
| rpme lsu ribosomal protein l31p | Cabys_688 | A8ER63 | + | 797629 - 797829 | 7428.09 |
| putative conserved protein yqhq | Cabys_689 | P54515 | + | 797923 - 798933 | 37339.5 |
| prfa bacterial peptide chain release factor 1 (brf-1) | Cabys_690 | C4XIQ1 | + | 798942 - 800021 | 40323.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.