Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized conserved protein ybbc, duf1343 family | Cabys_641 | P40407 | + | 749772 - 751004 | 46194.2 |
| transposase domain (duf772) | Cabys_642 | Not Available | - | 751069 - 752655 | 61352.2 |
| hypothetical protein | Cabys_643 | Not Available | - | 752652 - 752795 | 5170.15 |
| transposase domain (duf772) | Cabys_644 | Not Available | - | 752844 - 754430 | 61352.2 |
| hypothetical protein | Cabys_645 | Not Available | + | 755382 - 755540 | 5821.98 |
| alpha-glucosidase | Cabys_646 | G8JZS4 | - | 755522 - 757552 | 78314.4 |
| sigma-b regulation protein rsbu (phosphoserine phosphatase) | Cabys_647 | P40399 | - | 757964 - 759739 | 66637.1 |
| serine/threonine-protein kinase rsbw | Cabys_648 | O50231 | - | 759746 - 760192 | 16989.6 |
| anti-sigma b factor antagonist | Cabys_649 | Q9WVX8 | - | 760232 - 760573 | 12896.4 |
| serine phosphatase rsbu, regulator of sigma subunit | Cabys_650 | P40399 | - | 760588 - 762183 | 60606.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.