Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| site-specific dna-methyltransferase (cytosine-n4-specific) | Cabys_601 | P11409 | + | 705139 - 705786 | 25190.2 |
| hypothetical protein | Cabys_602 | Not Available | + | 705857 - 706003 | 5851.19 |
| type ii restriction endonuclease | Cabys_603 | Not Available | + | 706161 - 706718 | 21522.4 |
| putative efflux protein, mate family | Cabys_604 | Q58119 | - | 706696 - 708075 | 50413.9 |
| hypothetical protein | Cabys_605 | Not Available | + | 708156 - 708290 | 5226.71 |
| tigr00375 family protein | Cabys_606 | Q5HN29 | + | 708328 - 711552 | 122036.0 |
| hypothetical protein | Cabys_607 | P37518 | + | 712408 - 713487 | 40755.1 |
| phoh-like atpase | Cabys_608 | O07635 | + | 713561 - 714973 | 54226.4 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_609 | P95493 | - | 715104 - 718637 | 130393.0 |
| transcriptional regulator, arsr family | Cabys_610 | P37309 | - | 718926 - 719270 | 13294.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.