Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein 1a | Cabys_591 | O66874 | - | 690781 - 692949 | 82200.5 |
| tfp pilus assembly protein pilf | Cabys_592 | P42810 | + | 693361 - 695046 | 65230.1 |
| protein of unknown function (duf4292) | Cabys_593 | Not Available | + | 695067 - 695834 | 29804.0 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_594 | Q1MJ95 | + | 695848 - 696771 | 35259.5 |
| glycosyltransferase, gt2 family | Cabys_595 | D4GYH2 | + | 696783 - 697817 | 39249.2 |
| hypothetical protein | Cabys_596 | Not Available | + | 697931 - 700327 | 92171.6 |
| glycosyltransferase involved in cell wall bisynthesis | Cabys_597 | Not Available | + | 700647 - 701576 | 36059.3 |
| dna-3-methyladenine glycosylase | Cabys_598 | Q11UN5 | + | 701586 - 702218 | 23792.1 |
| methyltransferase domain-containing protein | Cabys_599 | Q0I3Y4 | + | 702231 - 703031 | 31358.7 |
| transposase dde domain-containing protein | Cabys_600 | Not Available | + | 703407 - 704963 | 60645.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.