Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc/manganese transport system substrate-binding protein/zinc transport system substrate-binding protein | Cabys_563 | P42363 | - | 653967 - 655007 | 39089.5 |
| zinc-regulated tonb-dependent outer membrane receptor | Cabys_564 | O67918 | - | 655023 - 656345 | 50486.9 |
| hypothetical protein | Cabys_565 | Not Available | - | 656545 - 656829 | 10094.4 |
| hypothetical protein | Cabys_566 | Not Available | + | 656780 - 656911 | 4927.21 |
| hypothetical protein | Cabys_567 | Not Available | + | 657308 - 657424 | 4619.67 |
| glycerol 2-dehydrogenase (nad+) | Cabys_568 | Q9WYQ4 | + | 657527 - 658624 | 38924.9 |
| alcohol dehydrogenase | Cabys_569 | Q59477 | + | 658852 - 659997 | 40433.9 |
| transposase domain (duf772) | Cabys_570 | Not Available | - | 660180 - 661766 | 61382.2 |
| Trna-ala | Not Available | Not Available | + | 662619 - 662691 | Not Available |
| Trna-leu | Not Available | Not Available | + | 662822 - 662905 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.