Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nadph-dependent 2,4-dienoyl-coa reductase, sulfur reductase | Cabys_553 | Q9UYU5 | + | 642513 - 643880 | 49146.8 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | Cabys_554 | Q51741 | - | 644436 - 645521 | 41971.9 |
| hypothetical protein | Cabys_555 | Not Available | + | 645582 - 645710 | 5314.63 |
| l-alanine-dl-glutamate epimerase | Cabys_556 | Q8A861 | - | 645707 - 646852 | 42398.5 |
| cell wall-associated hydrolase, nlpc family | Cabys_557 | Q736M3 | - | 646865 - 647986 | 42874.6 |
| competence protein comec | Cabys_558 | P39695 | - | 648091 - 650481 | 89604.9 |
| ribonuclease bn, trna processing enzyme | Cabys_559 | P9WGC0 | - | 650503 - 651243 | 27776.4 |
| protein of unknown function (duf4352) | Cabys_560 | Not Available | + | 651316 - 652326 | 38530.2 |
| abc-type mn2+/zn2+ transport system, permease component | Cabys_561 | Q92AG0 | - | 652457 - 653707 | 46577.8 |
| hypothetical protein | Cabys_562 | Not Available | - | 653688 - 653840 | 5616.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.