Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box-containing protein | Cabys_543 | P0DOA0 | + | 627131 - 630667 | 133950.0 |
| hypothetical protein | Cabys_544 | Not Available | - | 630781 - 630978 | 7902.8 |
| pas domain s-box-containing protein | Cabys_545 | P0DOA0 | + | 630996 - 634124 | 118624.0 |
| pas domain s-box-containing protein | Cabys_546 | Q55168 | + | 634293 - 635855 | 61081.1 |
| response regulator receiver domain-containing protein | Cabys_547 | Q55169 | + | 635857 - 636312 | 17575.3 |
| 4-hydroxy-3-polyprenylbenzoate decarboxylase | Cabys_548 | O34023 | + | 636446 - 638269 | 67869.8 |
| rna polymerase sigma-70 factor, ecf subfamily | Cabys_549 | Q45585 | + | 638345 - 638953 | 24049.9 |
| hypothetical protein | Cabys_550 | Not Available | + | 638946 - 639695 | 29143.7 |
| heavy-metal resistance | Cabys_551 | Not Available | + | 639824 - 640393 | 20661.6 |
| sulfide-quinone oxidoreductase | Cabys_552 | O67931 | - | 640685 - 642118 | 53437.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.