Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix protein | Cabys_533 | Not Available | + | 620687 - 621049 | 13691.8 |
| lipoprotein spr/probable lipoprotein nlpc | Cabys_534 | P45296 | - | 621046 - 621492 | 16613.9 |
| geranylgeranyl diphosphate synthase, type i/geranylgeranyl diphosphate synthase, type ii | Cabys_535 | P39464 | - | 621526 - 622479 | 36425.2 |
| pts system, fructose-specific iic component | Cabys_536 | P71012 | - | 622479 - 622937 | 17393.2 |
| hypothetical protein | Cabys_537 | Not Available | + | 622912 - 623034 | 4722.93 |
| transposase | Cabys_538 | Q06126 | + | 623168 - 624400 | 48190.5 |
| hypothetical protein | Cabys_539 | Not Available | + | 624554 - 624856 | 11166.0 |
| hypothetical protein | Cabys_540 | Not Available | + | 625813 - 626244 | 16630.9 |
| circadian clock protein kaib | Cabys_541 | A9BBW6 | + | 626605 - 626874 | 10371.5 |
| hypothetical protein | Cabys_542 | Not Available | + | 626940 - 627119 | 7212.29 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.