Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| membrane fusion protein, cobalt-zinc-cadmium efflux system | Cabys_493 | P13510 | - | 569210 - 570343 | 42519.9 |
| cobalt-zinc-cadmium resistance protein czca | Cabys_494 | P94177 | - | 570355 - 574704 | 161470.0 |
| hypothetical protein | Cabys_495 | Not Available | - | 574723 - 574869 | 5918.48 |
| hypothetical protein | Cabys_496 | Not Available | + | 575058 - 575177 | 4664.83 |
| signal transduction histidine kinase | Cabys_497 | Q2FH24 | - | 575195 - 576571 | 52172.6 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | Cabys_498 | O34903 | - | 576568 - 577242 | 25585.8 |
| pas domain s-box-containing protein | Cabys_499 | P0DOA0 | - | 578049 - 580295 | 83127.8 |
| circadian clock protein kaic | Cabys_500 | Q7U8R3 | - | 580285 - 581781 | 55740.5 |
| erf1 domain-containing protein 3 | Cabys_501 | Not Available | - | 583003 - 584220 | 46339.9 |
| uncharacterized membrane protein hded, duf308 family | Cabys_502 | Not Available | - | 584266 - 584838 | 20956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.