Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-asn | Not Available | Not Available | + | 547673 - 547745 | Not Available |
| putative endonuclease | Cabys_474 | Not Available | + | 547773 - 547982 | 8548.27 |
| hypothetical protein | Cabys_475 | Not Available | + | 548074 - 548670 | 22660.0 |
| protein of unknown function (duf1446) | Cabys_476 | Not Available | + | 548827 - 550191 | 50529.9 |
| small uncharacterized protein | Cabys_477 | Not Available | + | 550298 - 550636 | 12163.9 |
| fibronectin type iii domain protein | Cabys_478 | P96156 | + | 550732 - 551679 | 34211.0 |
| heme-binding domain-containing protein | Cabys_479 | Not Available | - | 552008 - 552463 | 17432.6 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_480 | Q9MAP5 | - | 552873 - 554981 | 76953.1 |
| hypothetical protein | Cabys_481 | Not Available | - | 554997 - 555314 | 12105.1 |
| mechanosensitive ion channel | Cabys_482 | P77338 | - | 555454 - 556320 | 32852.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.