Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| panb ketopantoate hydroxymethyltransferase | Cabys_464 | Q2LTJ5 | + | 538042 - 538857 | 29864.5 |
| panc pantothenate synthetase | Cabys_465 | A5IN99 | + | 538838 - 539692 | 32335.1 |
| hypothetical protein | Cabys_466 | Not Available | + | 540358 - 540825 | 17709.5 |
| lytr cell envelope-related transcriptional attenuator | Cabys_467 | Not Available | + | 541042 - 541686 | 24168.6 |
| rsfs ribosome-associated protein | Cabys_468 | Q9KD89 | + | 541683 - 542036 | 13651.4 |
| args arginyl-trna synthetase | Cabys_469 | Q6AJJ9 | + | 542033 - 543667 | 62232.8 |
| sugar or nucleoside kinase, ribokinase family | Cabys_470 | Q5JEK6 | + | 543680 - 544579 | 33625.8 |
| signal transduction histidine kinase | Cabys_471 | P23545 | - | 544580 - 545773 | 45494.3 |
| hypothetical protein | Cabys_472 | Not Available | - | 545774 - 545980 | 8056.63 |
| pyruvate formate lyase activating enzyme | Cabys_473 | Q58218 | + | 546174 - 547187 | 38507.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.