Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rod shape-determining protein mreb | Cabys_454 | Q01465 | - | 529706 - 530740 | 37235.2 |
| muramoyltetrapeptide carboxypeptidase | Cabys_455 | O34851 | - | 530851 - 531792 | 35225.2 |
| hypothetical protein | Cabys_456 | Not Available | - | 531822 - 531938 | 4296.48 |
| hypothetical protein | Cabys_457 | Not Available | + | 532002 - 532301 | 11817.3 |
| hypothetical protein | Cabys_458 | Not Available | - | 532307 - 532495 | 7021.55 |
| endonuclease/exonuclease/phosphatase family protein | Cabys_459 | Not Available | + | 532670 - 533611 | 35392.6 |
| vanz like family protein | Cabys_460 | O13689 | - | 533598 - 534017 | 16140.2 |
| serine/threonine-protein kinase rsbw | Cabys_461 | P0C1V2 | + | 534103 - 534534 | 16332.5 |
| mnma trna-specific 2-thiouridylase | Cabys_462 | B3ETH8 | + | 534551 - 535675 | 41854.1 |
| transposase domain (duf772) | Cabys_463 | Not Available | + | 535988 - 537574 | 61366.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.