Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc carboxypeptidase | Cabys_444 | A6XHF7 | + | 513295 - 515085 | 69745.1 |
| protein of unknown function (duf1460) | Cabys_445 | Not Available | + | 515085 - 515993 | 34990.6 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_446 | P29068 | + | 515995 - 518430 | 91110.6 |
| transposase dde domain-containing protein | Cabys_447 | Q46731 | + | 518629 - 520887 | 86792.7 |
| transposase | Cabys_448 | Not Available | + | 521133 - 522929 | 70184.1 |
| tetratricopeptide repeat-containing protein | Cabys_449 | Not Available | - | 523070 - 524935 | 72312.6 |
| rod shape determining protein roda | Cabys_450 | P44468 | - | 525171 - 526394 | 46041.2 |
| peptidoglycan glycosyltransferase | Cabys_451 | P44469 | - | 526396 - 528258 | 70164.7 |
| rod shape-determining protein mred | Cabys_452 | Not Available | - | 528258 - 528746 | 18286.4 |
| rod shape-determining protein mrec | Cabys_453 | Q70AN6 | - | 528730 - 529539 | 30579.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.