Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Cabys_424 | Not Available | + | 484241 - 485224 | 39284.0 |
| hypothetical protein | Cabys_425 | Not Available | - | 485259 - 485465 | 7959.02 |
| hypothetical protein | Cabys_426 | Not Available | - | 485732 - 485875 | 5607.06 |
| hypothetical protein | Cabys_427 | Not Available | + | 485934 - 486812 | 34622.4 |
| o-antigen ligase | Cabys_428 | Not Available | + | 486972 - 488762 | 69268.0 |
| rnd family efflux transporter, mfp subunit | Cabys_429 | A4WCC0 | + | 488763 - 489893 | 42149.1 |
| hydrophobic/amphiphilic exporter-1, hae1 family | Cabys_430 | P25197 | + | 489972 - 492932 | 110690.0 |
| multidrug efflux pump subunit acrb | Cabys_431 | D3V7P4 | + | 492929 - 496099 | 121969.0 |
| tfp pilus assembly protein pilf | Cabys_432 | P54389 | + | 496541 - 497821 | 49579.1 |
| peroxiredoxin | Cabys_433 | Q5KXL9 | + | 497818 - 498696 | 34487.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.