Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| amino acid transporter | Cabys_394 | P55016 | - | 450600 - 452765 | 79647.6 |
| na+/h+ antiporter nhac | Cabys_395 | P44263 | - | 452781 - 454694 | 70397.4 |
| gwxtd domain-containing protein | Cabys_396 | Not Available | + | 454879 - 456147 | 50792.9 |
| oxidoreductase family, nad-binding rossmann fold | Cabys_397 | Q6M0B9 | + | 456156 - 457217 | 39747.1 |
| selenocysteine lyase/cysteine desulfurase | Cabys_398 | O32164 | + | 457265 - 458671 | 52904.2 |
| alanyl-trna synthetase | Cabys_399 | O57734 | + | 458692 - 459867 | 45028.0 |
| myxococcales-restricted protein, tigr02265 family | Cabys_400 | Not Available | + | 459892 - 460440 | 21121.4 |
| satd family (satd) | Cabys_401 | Not Available | + | 460444 - 461088 | 24951.3 |
| membrane protease ydil, caax protease family | Cabys_402 | Not Available | - | 461076 - 461894 | 30606.3 |
| rna methyltransferase, trmh family | Cabys_403 | P94538 | - | 461887 - 462696 | 30071.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.