Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone/menaquinone biosynthesis c-methylase ubie | Cabys_4148 | Q05197 | - | 4907801 - 4908418 | 23391.9 |
| hypothetical protein | Cabys_4149 | Not Available | - | 4908438 - 4909625 | 45316.0 |
| multicopper oxidase with three cupredoxin domains (includes cell division protein ftsp and spore coat protein cota) | Cabys_4150 | P59571 | - | 4909658 - 4910848 | 45849.4 |
| hypothetical protein | Cabys_4151 | Not Available | - | 4911073 - 4911189 | 4134.32 |
| uncharacterized conserved protein, duf302 family | Cabys_4152 | Not Available | - | 4911344 - 4911730 | 13940.9 |
| putative membrane protein | Cabys_4153 | Not Available | - | 4911882 - 4913036 | 42657.1 |
| putative meta-pathway of phenol degradation | Cabys_4154 | Not Available | - | 4913059 - 4913886 | 30521.6 |
| hypothetical protein | Cabys_4155 | Not Available | - | 4913883 - 4914482 | 23152.1 |
| putative membrane protein | Cabys_4156 | Not Available | - | 4914553 - 4914783 | 8508.43 |
| signal transduction histidine kinase | Cabys_4157 | P39764 | + | 4915153 - 4916244 | 41540.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.