Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein, yigz family | Cabys_4059 | P27862 | + | 4813767 - 4814372 | 22734.0 |
| abc-2 type transport system atp-binding protein | Cabys_4060 | C0SPB4 | + | 4814374 - 4815294 | 35304.2 |
| abc-2 family transporter protein | Cabys_4061 | Q58430 | + | 4815291 - 4816793 | 58053.9 |
| hypothetical protein | Cabys_4062 | Not Available | + | 4816810 - 4817184 | 14227.1 |
| hypothetical protein | Cabys_4063 | Not Available | - | 4817203 - 4819140 | 75017.3 |
| phospholipid/cholesterol/gamma-hch transport system atp-binding protein | Cabys_4064 | P45031 | - | 4819241 - 4819972 | 26669.1 |
| phospholipid/cholesterol/gamma-hch transport system permease protein | Cabys_4065 | Q9ZE51 | - | 4819972 - 4821063 | 39609.3 |
| abc-type transport auxiliary lipoprotein component | Cabys_4066 | Not Available | - | 4821075 - 4821698 | 24422.9 |
| phospholipid/cholesterol/gamma-hch transport system substrate-binding protein | Cabys_4067 | P29285 | - | 4821679 - 4822662 | 36432.8 |
| hypothetical protein | Cabys_4068 | Not Available | + | 4822794 - 4823045 | 9107.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.