Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| putative dehydrogenase | Cabys_374 | A0A024SMV2 | - | 427396 - 428385 | 37456.7 |
| uncharacterized conserved protein, duf2147 family | Cabys_375 | Not Available | - | 428523 - 428966 | 17262.9 |
| upf0489 domain-containing protein | Cabys_376 | Not Available | - | 429036 - 429770 | 28520.1 |
| thioredoxin reductase (nadph) | Cabys_377 | Q92I02 | - | 429877 - 430809 | 33930.6 |
| transposase domain (duf772) | Cabys_378 | Not Available | - | 431323 - 432909 | 61382.2 |
| transposase dde domain-containing protein | Cabys_379 | Q46731 | + | 433190 - 435448 | 86874.9 |
| rna polymerase, sigma-24 subunit, rpoe | Cabys_380 | Q45585 | + | 435885 - 436478 | 23368.7 |
| hypothetical protein | Cabys_381 | Not Available | + | 436465 - 436734 | 10534.8 |
| hypothetical protein | Cabys_382 | Not Available | - | 436855 - 436968 | 3977.76 |
| long-chain acyl-coa synthetase | Cabys_383 | Q9JID6 | + | 437220 - 438911 | 63292.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.