Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbb/tolq | Cabys_3990 | Not Available | + | 4735379 - 4736746 | 51473.1 |
| hypothetical protein | Cabys_3991 | Not Available | + | 4736763 - 4737236 | 18042.0 |
| hypothetical protein | Cabys_3992 | Not Available | + | 4737240 - 4737773 | 20490.5 |
| wd domain-containing protein, g-beta repeat-containing protein | Cabys_3993 | Q6L4F8 | + | 4737792 - 4739177 | 52059.5 |
| carbohydrate family 9 binding domain-like | Cabys_3994 | Not Available | + | 4739284 - 4741929 | 101344.0 |
| hypothetical protein | Cabys_3995 | Not Available | - | 4742628 - 4742774 | 5523.84 |
| hypothetical protein | Cabys_3996 | Not Available | + | 4742783 - 4742953 | 6435.29 |
| nodulation efficiency protein nfed | Cabys_3997 | O59179 | + | 4743121 - 4744416 | 46671.8 |
| regulator of protease activity hflc, stomatin/prohibitin superfamily | Cabys_3998 | O28852 | + | 4744433 - 4745221 | 29625.3 |
| trap transporter t-component | Cabys_3999 | Not Available | + | 4745422 - 4746294 | 33104.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.