Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| outer membrane protein tolc | Cabys_3970 | Q54001 | + | 4709756 - 4711159 | 54083.6 |
| hlyd family secretion protein | Cabys_3971 | P58411 | + | 4711241 - 4712440 | 43870.1 |
| macb putative abc transport system atp-binding protein | Cabys_3972 | O34979 | + | 4712440 - 4713120 | 25316.7 |
| putative abc transport system permease protein | Cabys_3973 | Q6MPX9 | + | 4713120 - 4714355 | 46226.8 |
| putative abc transport system permease protein | Cabys_3974 | Q6MPX9 | + | 4714366 - 4715595 | 44560.0 |
| solute:na+ symporter, sss family | Cabys_3975 | Q9VE46 | - | 4715573 - 4716967 | 51829.0 |
| thiamine diphosphokinase | Cabys_3976 | P41888 | - | 4716960 - 4717592 | 23663.3 |
| iron complex outermembrane recepter protein | Cabys_3977 | P76115 | - | 4717637 - 4720093 | 94469.6 |
| hypothetical protein | Cabys_3978 | Not Available | - | 4720286 - 4720729 | 16908.4 |
| protein of unknown function (duf4388) | Cabys_3979 | P13792 | + | 4720860 - 4722638 | 68023.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.