Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| recx regulatory protein | Cabys_3940 | Q8Y6J1 | + | 4672524 - 4673150 | 24480.4 |
| protein of unknown function (duf2905) | Cabys_3941 | C0H463 | - | 4673234 - 4673443 | 8131.53 |
| two-component system, ompr family, response regulator | Cabys_3942 | A6X580 | - | 4673453 - 4673812 | 13632.6 |
| alas alanyl-trna synthetase | Cabys_3943 | Q8KG04 | + | 4673975 - 4676587 | 98974.8 |
| udp-galactose 4-epimerase | Cabys_3944 | Q59083 | + | 4676909 - 4677889 | 36396.5 |
| rna polymerase sigma-70 factor, ecf subfamily | Cabys_3945 | Q45585 | - | 4678161 - 4678742 | 22850.6 |
| saccharopine dehydrogenase (nadp+, l-glutamate forming) | Cabys_3946 | O59711 | + | 4679417 - 4680739 | 49463.3 |
| alpha-aminoadipic semialdehyde synthase | Cabys_3947 | Q9SMZ4 | + | 4681046 - 4682182 | 42909.6 |
| hypothetical protein | Cabys_3948 | Not Available | - | 4682201 - 4682329 | 4943.11 |
| hypothetical protein | Cabys_3949 | Not Available | - | 4682345 - 4682479 | 4892.88 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.