Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transport protein exbd | Cabys_3910 | Q9ZHV9 | + | 4626943 - 4627353 | 15350.2 |
| homoserine dehydrogenase | Cabys_3911 | P29365 | + | 4627366 - 4628676 | 48839.8 |
| 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) | Cabys_3912 | P76004 | + | 4628677 - 4629348 | 24838.2 |
| xtp/ditp diphosphohydrolase/tetrapyrrole methylase family protein / mazg family protein | Cabys_3913 | P44723 | + | 4629338 - 4630117 | 30463.3 |
| signal transduction histidine kinase | Cabys_3914 | Q8Z332 | + | 4630104 - 4631153 | 40248.5 |
| two-component system, ntrc family, nitrogen regulation response regulator ntrx | Cabys_3915 | Q06065 | + | 4631146 - 4632498 | 51985.8 |
| hypothetical protein | Cabys_3916 | Not Available | + | 4632700 - 4632912 | 8127.81 |
| response regulator receiver domain-containing protein | Cabys_3917 | Not Available | + | 4632929 - 4633306 | 15009.5 |
| 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family | Cabys_3918 | A9BJC1 | - | 4633511 - 4635115 | 59769.0 |
| hypothetical protein | Cabys_3919 | Not Available | - | 4635133 - 4636395 | 48163.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.