Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutaredoxin-like domain protein | Cabys_3900 | Q5HRY2 | - | 4615449 - 4616102 | 24914.8 |
| thioredoxin | Cabys_3901 | P0A4L1 | - | 4616119 - 4616460 | 12760.5 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3902 | Not Available | + | 4617311 - 4618507 | 42483.4 |
| cell wall protein awa1p | Cabys_3903 | Not Available | + | 4618745 - 4620079 | 49020.1 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3904 | Not Available | + | 4620116 - 4620997 | 32380.5 |
| 2-methylcitrate dehydratase | Cabys_3905 | A6NK06 | - | 4621098 - 4622471 | 50772.4 |
| 23s rrna (guanosine2251-2'-o)-methyltransferase | Cabys_3906 | Q06753 | + | 4622872 - 4623603 | 27098.8 |
| pglz domain-containing protein | Cabys_3907 | P35163 | + | 4623681 - 4625237 | 60521.9 |
| membrane protein | Cabys_3908 | Not Available | + | 4625385 - 4626281 | 34164.7 |
| biopolymer transport protein exbb | Cabys_3909 | O27101 | + | 4626286 - 4626930 | 23781.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.