Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphotransferase system, enzyme i, ptsi | Cabys_3890 | O69251 | + | 4604861 - 4606636 | 67933.2 |
| bifunctional phosphoglucose/phosphomannose isomerase | Cabys_3891 | Q44407 | + | 4606646 - 4607686 | 39306.5 |
| metk methionine adenosyltransferase | Cabys_3892 | A5CYJ7 | + | 4607761 - 4608897 | 41361.7 |
| upp uracil phosphoribosyltransferase | Cabys_3893 | B8E009 | + | 4609008 - 4609634 | 23211.6 |
| hypothetical protein | Cabys_3894 | Not Available | + | 4609677 - 4610999 | 50952.3 |
| hypothetical protein | Cabys_3895 | Not Available | - | 4611008 - 4611592 | 21849.5 |
| hd domain-containing protein | Cabys_3896 | O67012 | - | 4611615 - 4612037 | 15959.4 |
| insulinase (peptidase family m16) | Cabys_3897 | P55680 | - | 4612039 - 4613409 | 52092.7 |
| zinc protease | Cabys_3898 | P55679 | - | 4613406 - 4614692 | 50187.1 |
| cytochrome c biogenesis protein ccmg, thiol:disulfide interchange protein dsbe | Cabys_3899 | A0RBT0 | - | 4614845 - 4615429 | 21349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.