Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribh 6,7-dimethyl-8-ribityllumazine synthase | Cabys_3880 | B1IL45 | + | 4592567 - 4593028 | 16484.1 |
| ligand-binding sensor domain-containing protein | Cabys_3881 | Not Available | + | 4593057 - 4595438 | 88789.0 |
| dna replication and repair protein recn | Cabys_3882 | Q9K974 | + | 4595441 - 4597165 | 65024.0 |
| hypothetical protein | Cabys_3883 | Not Available | + | 4597242 - 4597901 | 25303.5 |
| atp-binding protein involved in chromosome partitioning | Cabys_3884 | O24999 | + | 4598052 - 4599107 | 38244.6 |
| crispr-associated protein, cas6 family | Cabys_3885 | Q57820 | + | 4599295 - 4600107 | 31937.8 |
| subtilase family protein | Cabys_3886 | P29144 | + | 4600320 - 4603148 | 106378.0 |
| phosphotransferase system, mannose/fructose/n-acetylgalactosamine-specific component iic | Cabys_3887 | Not Available | + | 4603165 - 4603857 | 25286.0 |
| pts system d-mannose-specific iid component, man family | Cabys_3888 | P69805 | + | 4603844 - 4604608 | 29229.8 |
| phosphocarrier protein | Cabys_3889 | P23537 | + | 4604605 - 4604874 | 9796.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.