Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii family | Cabys_3870 | P14179 | + | 4580324 - 4580659 | 12391.1 |
| cd2+/zn2+-exporting atpase | Cabys_3871 | P58414 | + | 4580984 - 4582885 | 67647.9 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3872 | Not Available | + | 4583574 - 4585502 | 70781.0 |
| putative restriction endonuclease | Cabys_3873 | Not Available | + | 4585581 - 4585901 | 12225.0 |
| putative restriction endonuclease | Cabys_3874 | Not Available | + | 4585898 - 4586152 | 9762.83 |
| por secretion system c-terminal sorting domain-containing protein | Cabys_3875 | Not Available | - | 4586890 - 4588830 | 70803.5 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase | Cabys_3876 | O66534 | + | 4589214 - 4590311 | 41055.4 |
| riboflavin synthase alpha chain | Cabys_3877 | P16440 | + | 4590343 - 4590990 | 23782.7 |
| hypothetical protein | Cabys_3878 | Not Available | - | 4590970 - 4591086 | 4408.3 |
| ribba gtp cyclohydrolase ii /3,4-dihydroxy-2-butanone 4-phosphate synthase | Cabys_3879 | Q3B2I6 | + | 4591318 - 4592544 | 45940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.