Kingdom
Pseudomonadati
Phylum
Calditrichota
Class
Calditrichia
Order
Calditrichales
Family
Calditrichaceae
Genus
Caldithrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Calditrichota |
| Class | Calditrichia |
| Order | Calditrichales |
| Family | Calditrichaceae |
| Genus | Caldithrix |
| Species | Caldithrix abyssi |
| Strain | LF13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Caldithrix abyssi LF13
Accession NumberCP018099.1
Gene Summary
Adenine Count
1364352 bp
Thymine Count
1369075 bp
Guanine Count
1122865 bp
Cytosine Count
1122249 bp
Genome Length
4978541 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
59 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | Cabys_3860 | Q06067 | - | 4569336 - 4570850 | 58697.0 |
| doubled cxxch domain-containing protein | Cabys_3861 | P0DSN3 | - | 4570858 - 4572546 | 61905.2 |
| nhl repeat-containing protein | Cabys_3862 | Not Available | - | 4572543 - 4573517 | 36955.8 |
| transcriptional regulator, arsr family | Cabys_3863 | Q55940 | + | 4573659 - 4574066 | 15707.2 |
| hypothetical protein | Cabys_3864 | Not Available | + | 4574101 - 4574508 | 15352.7 |
| hypothetical protein | Cabys_3865 | Not Available | - | 4574544 - 4574918 | 13479.3 |
| outer membrane protein, cobalt-zinc-cadmium efflux system | Cabys_3866 | P13509 | + | 4574887 - 4576098 | 44941.8 |
| membrane fusion protein, cobalt-zinc-cadmium efflux system | Cabys_3867 | P13510 | + | 4576121 - 4577071 | 35210.9 |
| hypothetical protein | Cabys_3868 | Not Available | + | 4577049 - 4577168 | 4488.55 |
| cobalt-zinc-cadmium resistance protein czca | Cabys_3869 | P94177 | + | 4577161 - 4580268 | 114272.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.